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Arnaoudova, E. ., Haws, D. ., Huggins, P. ., Jaromczyk, J. ., Moore, N. ., Schardl, C. ., & Yoshida, R. . Statistical phylogenetic tree analysis using differences of means. Frontiers in Neuroscience, 4. https://doi.org/10.3389/fnins.2010.00047 (Original work published 2010)

Schardl, C. ., Young, C. ., Hesse, U. ., Amyotte, S. ., Andreeva, K. ., Calie, P. ., … Zeng, Z. . Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci. PLoS Genetics, 9(2), e1003323. https://doi.org/10.1371/journal.pgen.1003323 (Original work published 2013)

Weyenberg, G. ., Huggins, P. ., Schardl, C. ., Howe, D. ., & Yoshida, R. . (2014). kdetrees: Non-parametric estimation of phylogenetic tree distributions. Bioinformatics (Oxford, England), 30(16), 2280-7. https://doi.org/10.1093/bioinformatics/btu258 (Original work published 2014)

Kang, Q. ., Schardl, C. ., Moore, N. ., & Yoshida, R. . (2018). CURatio: Genome-wide phylogenomic analysis method using ratios of total branch lengths. IEEE/ACM/Transactions/on/Computational/Biology/and/Bioinformatics. https://doi.org/10.1109/TCBB.2018.2878564 (Original work published 2018)

Pan, J. ., Bhardwaj, M. ., Nagabhyru, P. ., Grossman, R. ., & Schardl, C. . Enzymes from fungal and plant origin required for chemical diversification of insecticidal loline alkaloids in grass-Epichloë symbiota. PloS One, 9(12), e115590. https://doi.org/10.1371/journal.pone.0115590 (Original work published 2014)

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